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Feature: is size everything?

Controlling human brain size

We all know that dinosaurs had brains the size of hard-boiled eggs, while a comparatively massive brain has enabled us otherwise puny humans to dominate the globe. But how did we come to acquire our big brains? Recently, human genetics, genome sequencing projects and cell biology have come together to provide a fascinating insight into the origins of our most important organ.

Should the things we do ever make you fear that intelligent life has yet to arrive on Earth, it is cheering to recall that humans do in fact have unusually large brains for our size. If you doubt it, check with a mother who remembers giving birth. About 20 weeks into a pregnancy, the brain starts adding neurons at a startling rate, an expansion that continues until two years after the baby is born.

When the expansion falters, it makes for an easier delivery, but of a microcephalic – small-brained – infant. This condition, which is diagnosed by measuring skull size, can be caused by infection or serious alcohol abuse during pregnancy. Sometimes, though, it is due to a genetic alteration.

In a revealing series of investigations over the last ten years, Geoff Woods and his colleagues have been pinning down the genes involved. Their interest is clinical, but the work also raises intriguing questions about the human story. As primates evolved over the last few million years, when and how did the changes begin that lifted one lineage to a higher level of awareness? How did we come to be the ones who not just are products of evolution, but can ask questions about it?

A clinical issue

The recent clues are an unexpected by-product of the British textile industry's recruitment of workers from abroad. In the 1950s and 1960s, many people from rural Pakistan settled in Bradford. Over the next decades, health workers in Yorkshire became aware of a tradition of cousin marriage, which meant that some recessive genetic conditions were relatively common among some families. At the same time, these families often had little contact with health services.

Geoff Woods, a paediatrician moving into clinical genetics, arrived in neighbouring Leeds in the mid-1990s, just when the local health service was gearing up to deal with these problems better. An Asian genetic counsellor, soon joined by two more, helped to break down the communication barriers. And it became apparent that extended families, tightly genetically interwoven, had advantages for research. It has become feasible to map a disease-causing gene using just one of these closely interrelated families.

Dr Woods quickly noticed that he was seeing an unusual number of microcephalic children in his clinic: the incidence of what is formally designated autosomal recessive primary microcephaly (MCPH) is about 20 per million births among the Pakistani population, or ten times the rate normally seen in the UK. "We thought, they have been a relatively isolated population: we'll go and look for the gene."

In fact, the turbulent history of northern Pakistan meant that the population was much less isolated than he assumed. But marriage within families and clans did make the genetic analysis easier. Eight years and a lot of molecular biology later, he knows there are at least eight genes, maybe nine, and many different mutations. All seem to lead to the same condition. The children have small heads, and a nervous system that is reduced in size, especially the cerebral cortex. Structurally, everything looks quite normal. They grow up with mild or moderate learning difficulties. They learn to talk but find reading and writing difficult, and are slow learners, though are typically cheerful, easy going and well behaved. "In a rural setting in Pakistan," according to Dr Woods, "they fit in perfectly well, and can even have children."

The condition is more readily diagnosed in the UK, and the new genetics can now be used for prenatal testing or to help inform marriage choices: "What they really want is carrier testing," says Dr Woods. There are moves to make this available in Pakistan, too, although at the moment samples have to be sent to the UK for analysis. One or two affected children may not be seen as a serious problem. But Dr Woods recalls bringing together one large family in Pakistan for research sampling: when they all gathered for the first time in one house, it became apparent that there were no fewer than 11 individuals with microcephaly among them. "They decided there and then: no more marriage within the family."

Dr Woods has just moved from Leeds to the Cambridge Institute for Medical Research, where he is Wellcome Trust Clinical Research Fellow. The post is ideal, as it allows him to divide his time 50–50 between research and working with patients. He intends to work with the Pakistani populations of Peterborough, Luton and Bedford, to find the remaining MCPH gene products and the genes causing other neurodevelopmental diseases in these populations. The initial genetic identification is now more straightforward, he thinks: "Since the human genome has been properly annotated, our life has become so much easier".

Counting cells

Once a gene has been identified, its biological role can begin to be explored. This has revealed what may be the key process – control of cell division and, in particular, of the centrosome. "The centrosome is an organelle which has been a bit overlooked," says Dr Woods. As befits the name, it is at the centre of one of the most astonishingly orchestrated – and beautiful – processes in biology: the copying and relocation of the chromosomes during cell division.

Most of the time, the centrosome anchors an animal cell's array of microtubules, the protein filaments that it uses to drag things from place to place. When the time comes for the cell to divide, the centrosome is copied, and the centrosome pair organise their microtubules between them into the so-called mitotic spindle. It is this spindle that eventually pulls each set of chromosomes to opposite sides of the cell, ensuring each daughter cell ends up with one complete copy of the DNA – no more, no less.

A further twist is that cells in the developing embryo, including those involved in generating neurons, can divide symmetrically or asymmetrically. If a neural stem cell divides symmetrically, the result is two more neural progenitor cells. If it divides asymmetrically, it gives rise to one progenitor cell and a fully fledged neuron. The neuron then moves to the position in the brain where it can do its job after birth.

What decides whether a progenitor cell goes one way or the other? The process is poorly understood, but one clear difference is whether the mitotic spindle is oriented horizontally in the layer of neuroepithelial cells under development, or vertically.

Somewhere in all this, it is easy to imagine ways of controlling brain size, in the sense of the total number of neurons produced. And that idea is reinforced by the fact that three of the known MCPH proteins are found in the centrosome during cell division. "Our most obvious hypothesis would be that all these genes affect the ability to control the mitotic spindle axis," says Dr Woods. Exactly how is not yet known, but he speculates that the ASPM protein, for example, has the right structure to exert leverage when one end is latched on to a microtubule. "Perhaps it forms a kind of flying buttress, so that as the centrosome rotates, the spindle goes with it."

As well as this cellular work, Dr Woods will continue to focus on the clinical work and the genetic analysis, while building collaborations for evolutionary studies and work on flies and mice. Genetics is the starting point, but understanding what role the genes play in the brain means going deeper into cell biology and development. We may not be able to grow even bigger brains any time soon, but he is prepared to speculate that there may be results to come that will bring neural stem cell therapy a little nearer.

Genes with high IQ
Biologists have a useful shorthand code, linking a three-letter DNA codon to its corresponding amino acid. The amino acid isoleucine has been tagged as I, for instance, and glutamine as Q. As it happens, the so-called IQ domain is a well-known protein structural motif, rich in isoleucine and glutamine, and usually involved in binding the ubiquitous small protein calmodulin.
How intriguing, then, that the gene MCPH5, the most common cause of microcephaly, encodes a mitotic spindle-associated protein known as ASPM with an IQ domain. Moreover, it seems to have evolved by duplicating this motif, so early comparisons found that there are 24 copies in the equivalent gene of the fruit fly, 62 in the mouse and 74 in humans.
The tempting conclusion was that more IQ meant higher IQs. It turns out, though, that there are plenty of other mammals with just as many IQ repeats as humans. So the finding is not a deep insight into the development of intelligence, but more – says Geoff Woods – proof that God has a sense of humour.
Why we are not chimps
The various genome projects have brought us closer to other creatures in some ways. As well as the startling similarities between, say, chimpanzee and human genomes, the key genes that almost all organisms share reveal the commonalities of life.
But new genetic data also give us a clearer fix on human difference. Our big brains do confer abilities that set us apart even from other primates – such as language, theory of mind and enlarged notions of intentionality (I think that you think that he thinks that they think…). It is an obvious guess that this all started with the expansion of the cerebral cortex, the outer layer of the brain that has grown so fast it has numerous folds and wrinkles to pack it inside the skull.
What controlled this growth in relative brain size – encephalisation – and led to a human species with a brain three times as large as would be expected for an ape with the same body size? The MCPH genes are obvious candidates. Their altered forms lead to small brains, and their known functions are linked to production of new neurons.
One way to pursue this idea is to compare MCPH genes in different species. Some simple mutations in a gene do not alter the protein product, because each amino acid is denoted by a whole family of three-letter DNA codons. The sequences are said to be synonymous. Other mutations produce a new codon, which selects a different amino acid, so are non-synonymous. A rough measure of the strength of evolutionary selection can be derived from the ratio between synonymous and non-synonymous changes. On this basis, two of the known MCPH gene products show accelerated change along the lineage from apes to humans.
It needs a close look at what happened, and when, to judge the significance of these changes, though. And more detailed comparative analysis complicates the story, as Dr Woods and colleagues in the USA at the National Cancer Institute and the Beth Israel Medical Center in Boston reported earlier this ear. They found that the ASPM gene underwent rapid change in the primate common ancestor of gorillas, chimps and humans as much as 8 million years ago. But the real leap in brain size began only about 2 million years ago, and the expansion did not tail off until as recently as 200 000–400 000 years ago.
Dr Woods is still fascinated by the evolutionary questions, but emphasises that there is unlikely to be a single crucial gene that made us the big-brained bipeds we are today. There are probably many subtle factors to consider beyond sheer size, including neurotransmission and the number of synapses per neuron. And the fundamental processes of development often have options built in to make up crucial deficits. “The amazing thing is that there are so many checks and balances in mitosis and neurogenesis,” he says. After all, although the mutations found in the various MCPH genes seem to knock out their functions, all of the microcephalic subjects still have working brains.

Further reading

  • Bond J et al. A centrosomal mechanism involving CDK5RAP2 and CENPJ controls brain size. Nat Genet 2005;37(4):353–5.
  • Woods CG et al. Autosomal recessive primary microcephaly (MCPH): a review of clinical, molecular, and evolutionary findings. Am J Hum Genet 2005;76(5):717–28.
  • Kouprina N et al. Accelerated evolution of the ASPM gene controlling brain size begins prior to human brain expansion. PLoS Biol 2004;2(5):E126.
  • Woods CG. Human microcephaly. Curr Opin Neurobiol 2004;14(1):112–7.
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